Why choose NextGenSeek:

Deep expertise Across Genomics

NextGenSeek combines extensive experience analysing complex NGS datasets across a wide range of platforms and experimental designs. We routinely work with:

• Single-cell RNA-seq

• Differential gene expression analysis

• Metagenomics

We are comfortable tackling challenging datasets and ambiguous biological questions, ensuring your project is analysed with care, rigour, and appropriate statistical depth.

Rigorous, up-to-date analysis

We use modern, well-validated bioinformatics methods rather than black-box pipelines. Our workflows are built around:

• The latest algorithms and best-practice approaches

• Established bioinformatics tools

• Transparent and reproducible analysis

Analysis tailored to your experiments

We don’t believe in one-size-fits-all pipelines. Each project is designed around your specific research question, whether you’re working in:

• Cancer genomics

• Microbiome research

• Functional genomics

• Clinical or translational studies

Your biological context drives the analysis, not the other way around

Clear timelines, no shortcuts

We understand the importance of deadlines in research. Our streamlined workflows allow us to deliver results efficiently without compromising analytical quality, helping you stay on track with experiments, manuscripts, and grant timelines.

Explore our services:

Our NGS Data Analysis Services

We offer a range of analysis services to support genomics research across disciplines.

DNA Sequencing Analysis

Comprehensive analysis of genomic variation, including:

• SNPs, indels, and structural variants

• Detection of novel or rare mutations

• Interpretation of disease-relevant genetic changes

RNA-Seq Analysis

In-depth transcriptomic analysis to understand gene regulation and expression dynamics, including:

• Differential gene expression across conditions

• Discovery of novel transcripts and isoforms

• Analysis of alternative splicing events

• Exploration of regulatory networks

Single-cell RNA-Seq (scRNA-Seq)

High-resolution analysis of cellular heterogeneity, enabling you to:

• Profile cell populations at single-cell resolution

• Identify distinct cell types and states

• Reveal biological variation hidden in bulk RNA-seq data

Metagenomics Analysis

Advanced analysis of complex microbial communities, allowing you to:

• Characterise taxonomic composition

• Investigate functional potential

• Explore links between microbes, health, disease, and environment

Epigenomics

Analysis of epigenetic regulation across the genome, including:

• DNA methylation

• Histone modifications

• Chromatin accessibility

Our epigenomics services support studies into gene regulation, development, and disease mechanisms.

Get in touch

Whether you are planning an NGS experiment, analysing existing data, or interpreting complex results, NextGenSeek provides expert support at every stage.

Contact us to discuss your project, sequencing strategy, or analysis needs — and we’ll work with you to design a solution that fits your science.

NGS experiments are complex, and early design decisions strongly influence the quality and interpretability of the data. NextGenSeek offers consultancy to support robust experimental planning before sequencing begins.

We help you think through questions such as:

• What sequencing depth is appropriate for my study?

• Should I use single-end or paired-end sequencing?

• Which sequencing platform best fits my goals?

• Which library preparation strategy is most suitable?

• How should controls and replicates be designed?

Careful planning at this stage reduces costly mistakes and improves downstream analysis and interpretation.